{ "_id": "6aca026efe5cc25786e8412b", "Package": "kesernetwork", "Title": "Visualization of the KESER Network", "Version": "0.1.0", "Authors@R": "c(\nperson(\"Su-Chun\", \"Cheng\", email = \"scheng@parse-health.org\", role = c('cre', 'aut')),\nperson(\"PARSE LTD\", email = \"software@parse-health.org\", role = c('aut')),\nperson('VA CIPHER', role = c('aut')),\nperson('Verity Research', role = c('aut')),\nperson('CELEHS', role = c('aut')))", "Description": "A shiny app to visualize the knowledge networks for the\ncode concepts. Using co-occurrence matrices of EHR codes from\nVeterans Affairs (VA) and Massachusetts General Brigham (MGB),\nthe knowledge extraction via sparse embedding regression\n(KESER) algorithm was used to construct knowledge networks for\nthe code concepts. Background and details about the method can\nbe found at Chuan et al. (2021)\n.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "RoxygenNote": "7.2.3", "URL": "https://github.com/celehs/kesernetwork", "BugReports": "https://github.com/celehs/kesernetwork/issues", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev libssl-dev\nzlib1g-dev", "Repository": "https://celehs.r-universe.dev", "Date/Publication": "2023-05-04 20:34:11 UTC", "RemoteUrl": "https://github.com/celehs/kesernetwork", "RemoteRef": "HEAD", "RemoteSha": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-10 08:41:08 UTC", "User": "root" }, "Author": "Su-Chun Cheng [cre, aut],\nPARSE LTD [aut],\nVA CIPHER [aut],\nVerity Research [aut],\nCELEHS [aut]", "Maintainer": "Su-Chun Cheng ", "_user": "celehs", "_type": "src", "_file": "kesernetwork_0.1.0.tar.gz", "_fileid": "https://r2.ropensci.org/41df8f8ce636c8f89814fad0deedb0f4f38159513e58adcab7c6881520431649", "_filesize": 1355681, "_sha256": "41df8f8ce636c8f89814fad0deedb0f4f38159513e58adcab7c6881520431649", "_expires": "2027-01-18T09:16:29.000Z", "_created": "2026-10-10T08:41:08.000Z", "_published": "2026-10-10T09:16:30.791Z", "_buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 114174611295, "time": 186, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11665241988" }, { "job": 114174611199, "time": 151, "config": "linux-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11665261912" }, { "job": 114174611277, "time": 115, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "11665970462" }, { "job": 114174611260, "time": 112, "config": "macos-release-arm64", "r": "4.6.1", "check": "NOTE", "artifact": "11665716794" }, { "job": 114174115875, "time": 175, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11665046778" }, { "job": 114174611230, "time": 117, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11664847235" }, { "job": 114174611294, "time": 118, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "11665051888" }, { "job": 114174611238, "time": 80, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "11665355021" }, { "job": 114174611303, "time": 93, "config": "windows-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "11664887036" } ], "_upstream": "https://github.com/celehs/kesernetwork", "_commit": { "id": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "author": "Xin Xiong <74849195+xinxiong0238@users.noreply.github.com>", "committer": "GitHub ", "message": "Merge pull request #15 from celehs/dev\n\ndebug group display", "time": 1683232451 }, "_maintainer": { "name": "Su-Chun Cheng", "email": "scheng@parse-health.org" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "shinyBS", "role": "Depends" }, { "package": "shiny", "role": "Depends" }, { "package": "htmltools", "role": "Depends" }, { "package": "config", "version": ">= 0.3.1", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "DT", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "golem", "version": ">= 0.3.1", "role": "Imports" }, { "package": "Matrix", "role": "Imports" }, { "package": "plotly", "role": "Imports" }, { "package": "reactable", "role": "Imports" }, { "package": "rintrojs", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "shinycssloaders", "role": "Imports" }, { "package": "shinydashboard", "role": "Imports" }, { "package": "shinydashboardPlus", "role": "Imports" }, { "package": "shinyhelper", "role": "Imports" }, { "package": "shinyWidgets", "role": "Imports" }, { "package": "stringr", "role": "Imports" }, { "package": "visNetwork", "role": "Imports" }, { "package": "yaml", "role": "Imports" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "shinytest", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "celehs", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 2, "_contributors": [ { "user": "xinxiong0238", "count": 28, "uuid": 74849195 }, { "user": "chenh2017", "count": 25, "uuid": 26107804 }, { "user": "celehs", "count": 1, "uuid": 44823506 } ], "_userbio": { "uuid": 44823506, "type": "user", "name": "CELEHS", "followers": 61, "description": "Translational Data Science Center for a Learning Health System" }, "_downloads": { "count": 273, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/kesernetwork" }, "_devurl": "https://github.com/celehs/kesernetwork", "_searchresults": 8, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/kesernetwork.html", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_homeurl": "https://github.com/celehs/kesernetwork", "_realowner": "celehs", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2022-03-03" } ], "_exports": [ "run_app" ], "_help": [ { "page": "run_app", "title": "Run the Shiny Application", "topics": [ "run_app" ] } ], "_readme": "https://github.com/celehs/kesernetwork/raw/HEAD/README.md", "_rundeps": [ "askpass", "attempt", "base64enc", "bslib", "cachem", "cli", "codetools", "commonmark", "config", "cpp11", "crosstalk", "curl", "data.table", "digest", "dplyr", "DT", "evaluate", "farver", "fastmap", "fontawesome", "fresh", "fs", "generics", "ggplot2", "glue", "golem", "gtable", "highr", "htmltools", "htmlwidgets", "httpuv", "httr", "isoband", "jquerylib", "jsonlite", "knitr", "labeling", "later", "lattice", "lazyeval", "lifecycle", "litedown", "magrittr", "markdown", "Matrix", "memoise", "mime", "openssl", "otel", "pillar", "pkgconfig", "plotly", "promises", "purrr", "R6", "rappdirs", "RColorBrewer", "Rcpp", "reactable", "reactR", "rintrojs", "rlang", "rmarkdown", "rstudioapi", "S7", "sass", "scales", "shiny", "shinyBS", "shinycssloaders", "shinydashboard", "shinydashboardPlus", "shinyhelper", "shinyWidgets", "sourcetools", "stringi", "stringr", "sys", "tibble", "tidyr", "tidyselect", "tinytex", "utf8", "vctrs", "viridisLite", "visNetwork", "waiter", "withr", "xfun", "xtable", "yaml" ], "_vignettes": [ { "source": "getstarted.Rmd", "filename": "getstarted.html", "title": "Network", "engine": "knitr::rmarkdown", "headings": [ "Input center nodes", "Explore network information" ], "created": "2022-01-25 02:25:15", "modified": "2022-01-25 02:25:15", "commits": 1 } ], "_score": 4.301029995663981, "_indexed": true, "_nocasepkg": "kesernetwork", "_universes": [ "celehs" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-10-10T08:44:03.000Z", "distro": "resolute", "commit": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "fileid": "https://r2.ropensci.org/802d3df5f9590b286d623fc4e804b789a776e0b8d07e4fdc33c1d8bdc00e3532", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392" }, { "r": "4.6.1", "os": "linux", "version": "0.1.0", "date": "2026-10-10T08:43:27.000Z", "distro": "resolute", "commit": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "fileid": "https://r2.ropensci.org/7888cdf9122b2147fd18b54e38664187220df89e8764d86c0322445e0bd467d4", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392" }, { "r": "4.5.3", "os": "mac", "version": "0.1.0", "date": "2026-10-10T09:15:42.000Z", "commit": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "fileid": "https://r2.ropensci.org/021809f32e82de3c5741e584951397ca73b7d402888eeb39e587b0c42369b92a", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392" }, { "r": "4.6.1", "os": "mac", "version": "0.1.0", "date": "2026-10-10T09:12:57.000Z", "commit": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "fileid": "https://r2.ropensci.org/d72b4c8a21790bb33367378a17e06f8d6fd7a939448b4a8f23a7c4312002128a", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-10-10T08:43:21.000Z", "commit": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "fileid": "https://r2.ropensci.org/1bb0499b3c6d7151a5f75ebcf2a62707783d5801954ce09df6a4948f93013232", "status": "success", "buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-10-10T08:42:48.000Z", "commit": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "fileid": "https://r2.ropensci.org/84a538e2820e8fd8875f2ce381f93dafd99787483fdddeac75d74ed2a7ac50bf", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392" }, { "r": "4.5.3", "os": "win", "version": "0.1.0", "date": "2026-10-10T08:42:12.000Z", "commit": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "fileid": "https://r2.ropensci.org/139851fd4975fb3d70615911d2033e57cad0f5c63edb8493b1c5633b8367c51f", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392" }, { "r": "4.6.1", "os": "win", "version": "0.1.0", "date": "2026-10-10T08:42:19.000Z", "commit": "b248e263c211cbdd0f7d90fbba874c19a1d07173", "fileid": "https://r2.ropensci.org/3c6e343e388aa4d74585ea7168bebd7b36408341315639cfffda2b8c163512f8", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/celehs/actions/runs/38038561392" } ] }