Package: MUGS
Type: Package
Title: Multisource Graph Synthesis with EHR Data
Version: 0.1.0
Authors@R: c(
    person(given = "Mengyan", family = "Li", email = "mengyanli@bentley.edu", role = c("cre", "aut")),
    person(given = "Thomas", family = "Charlon", role = "ctb", comment = "ORCID: 0000-0001-7497-0470"),
    person(given = "Xiaoou", family = "Li", role = "aut"),
    person(given = "Tianxi", family = "Cai", role = "aut"),
    person(given = "PARSE", family = "LTD", email = "software@parse-health.org", role = "aut"),
    person(given = "CELEHS", family = "Team", role = "aut")
  )
Description: We develop Multi-source Graph Synthesis (MUGS), an
        algorithm designed to create embeddings for pediatric
        Electronic Health Record (EHR) codes by leveraging graphical
        information from three distinct sources: (1) pediatric EHR
        data, (2) EHR data from the general patient population, and (3)
        existing hierarchical medical ontology knowledge shared across
        different patient populations. See Li et al. (2024)
        <doi:10.1038/s41746-024-01320-4> for details.
License: GPL-3
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.2
URL: https://github.com/celehs/MUGS, https://celehs.github.io/MUGS/,
        https://doi.org/10.1038/s41746-024-01320-4
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
Imports: MASS, Matrix, fastDummies, doSNOW, dplyr, grplasso, foreach,
        glmnet, grpreg, inline, mvtnorm, pROC, parallel, RcppArmadillo,
        rsvd, methods
Depends: R (>= 3.5.0)
Config/testthat/edition: 3
Config/pak/sysreqs: libicu-dev
Repository: https://celehs.r-universe.dev
Date/Publication: 2025-05-15 03:22:59 UTC
RemoteUrl: https://github.com/celehs/mugs
RemoteRef: HEAD
RemoteSha: 840cae51bbf8e1a35dfbd15573a67feb01c927cc
NeedsCompilation: no
Packaged: 2026-06-14 10:14:34 UTC; root
Author: Mengyan Li [cre, aut],
  Thomas Charlon [ctb] (ORCID: 0000-0001-7497-0470),
  Xiaoou Li [aut],
  Tianxi Cai [aut],
  PARSE LTD [aut],
  CELEHS Team [aut]
Maintainer: Mengyan Li <mengyanli@bentley.edu>